protein.hpp File Reference

#include <engine/genetics/amino-acid.hpp>
#include <type_traits>

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Namespaces
	genetics
	Genetic algorithms.
	genetics::protein
	Functions which operate on sequences of IUPAC amino acid symbols.

Functions
template<class T , class ForwardIt1 , class ForwardIt2 >
T	genetics::protein::identity (ForwardIt1 first1, ForwardIt1 last1, ForwardIt2 first2)
	Returns the percent identity between two proteins. More...
template<class ForwardIt1 , class ForwardIt2 , class Matrix >
std::remove_all_extents< Matrix >::type	genetics::protein::score (ForwardIt1 first1, ForwardIt1 last1, ForwardIt2 first2, const Matrix &matrix)
	Scores two proteins using a substitution matrix. More...
template<class T , class ForwardIt1 , class ForwardIt2 , class Matrix >
T	genetics::protein::similarity (ForwardIt1 first1, ForwardIt1 last1, ForwardIt2 first2, const Matrix &matrix)
	Returns the percent similarity between two proteins. More...